SMTL ID : 7qvk.1

NM-02 in complex with HER2-ECD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 7 residues within 4Å: Chain A: C.230, L.231, A.232, C.233, N.237, S.239, G.240 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.46 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sawmynaden, K. et al., Co-crystallisation and humanisation of an anti-HER2 single-domain antibody as a theranostic tool. Plos One (2023)

Release Date

2023-02-01

Peptides

Receptor tyrosine-protein kinase erbB-2: A
NM-02: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
BBB

Receptor tyrosine-protein kinase erbB-2

NM-02