SMTL ID : 7qwf.1

BAZ2A bromodomain in complex with acetylpyrrole derivative compound 45

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x FS6: 1-[4-ethyl-2-methyl-5-[2-[2-(methylamino)ethyl]-1,3-thiazol-4-yl]-1~{H}-pyrrol-3-yl]ethanone(Non-covalent)

FS6.1: 10 residues within 4Å: Chain A: W.23, P.24, F.25, E.27, V.29, V.34, Y.37, F.79, N.80, V.86 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.25, A:V.34, A:Y.37, A:F.79, A:V.86 Hydrogen bonds: A:P.24, A:E.27, A:N.80 pi-Stacking: A:W.23

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: P.28, V.29, N.30, L.33 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.28, A:N.30 EDO.3: 3 residues within 4Å: Chain A: H.19, D.20, F.96 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.20 Water bridges: A:D.20, A:D.20

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 1 residues within 4Å: Chain A: D.74 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalle Vedove, A. et al., Identification of a BAZ2A-Bromodomain Hit Compound by Fragment Growing. Acs Med.Chem.Lett. (2022)

Release Date

2022-09-28

Peptides

Bromodomain adjacent to zinc finger domain protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2A

Related Entries With Identical Sequence