SMTL ID : 7qxr.3 (2 other biounits)

Azacoelenterazine-bound Renilla-type luciferase (AncFT)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x NSW: 3-(4-hydroxyphenyl)-8-[(4-hydroxyphenyl)methyl]-5-(phenylmethyl)-1$l^{4},4,7,8-tetrazabicyclo[4.3.0]nona-1(6),2,4-trien-9-one(Non-covalent)

NSW.1: 18 residues within 4Å: Chain A: D.108, W.109, E.132, S.133, V.134, W.144, D.150, I.151, F.168, F.169, L.173, S.177, P.208, I.211, F.249, F.250, H.273, F.274 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.134, A:I.151, A:F.169, A:L.173, A:L.173, A:F.250, A:F.274 Hydrogen bonds: A:D.108, A:S.133, A:D.150, A:D.150 Water bridges: A:V.135 pi-Stacking: A:F.249, A:F.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schenkmayerova, A. et al., Catalytic mechanism for Renilla-type luciferases. Nat Catal (2023)

Release Date

2022-12-07

Peptides

Fragment transplantation onto a hyperstable ancestor of haloalkane dehalogenases and Renilla luciferase (Anc-FT): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Fragment transplantation onto a hyperstable ancestor of haloalkane dehalogenases and Renilla luciferase (Anc-FT)

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