SMTL ID : 7qyo.1

BAZ2A bromodomain in complex with acetylpyrrole derivative compound 79

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.98 Å

Oligo State

monomer

Ligands

2 x GKI: 1-[2-methyl-4-(3-methylbutyl)-5-(2-piperazin-1-yl-1,3-thiazol-4-yl)-1~{H}-pyrrol-3-yl]ethanone(Non-covalent)

GKI.1: 13 residues within 4Å: Chain A: W.23, P.24, F.25, V.29, N.30, L.33, V.34, Y.37, C.76, F.79, N.80, V.86 Ligands: GKI.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.25, A:V.29, A:V.34, A:Y.37, A:F.79, A:V.86 Hydrogen bonds: A:P.24, A:N.80 pi-Stacking: A:W.23 GKI.2: 4 residues within 4Å: Chain A: W.23, L.33, E.85 Ligands: GKI.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.23 pi-Stacking: A:W.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalle Vedove, A. et al., Identification of a BAZ2A-Bromodomain Hit Compound by Fragment Growing. Acs Med.Chem.Lett. (2022)

Release Date

2022-09-28

Peptides

Bromodomain adjacent to zinc finger domain protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2A