SMTL ID : 7qyv.1

BAZ2A bromodomain in complex with acetylpyrrole derivative compound 109

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x GJ4: (2~{R})-1-[4-(4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrol-2-yl)-1,3-thiazol-2-yl]-~{N}-(4-oxidanylbutyl)piperazine-2-carboxamide(Non-covalent)

GJ4.1: 11 residues within 4Å: Chain A: W.23, P.24, F.25, P.28, V.29, N.30, V.34, Y.37, F.79, N.80, V.86 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.25, A:V.34, A:V.34, A:F.79, A:V.86 Hydrogen bonds: A:P.24, A:P.28, A:N.30, A:N.80 pi-Stacking: A:W.23

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: E.98, E.102 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalle Vedove, A. et al., Identification of a BAZ2A-Bromodomain Hit Compound by Fragment Growing. Acs Med.Chem.Lett. (2022)

Release Date

2022-09-28

Peptides

Bromodomain adjacent to zinc finger domain protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2A

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