SMTL ID : 7qz0.1

BAZ2A bromodomain in complex with acetylpyrrole derivative compound 83

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x GQX: 2-[4-(3-methyl-4-oxidanylidene-2,5,6,7-tetrahydroisoindol-1-yl)-1,3-thiazol-2-yl]guanidine(Non-covalent)

GQX.1: 9 residues within 4Å: Chain A: P.24, F.25, V.29, V.34, Y.37, F.79, N.80, V.86 Ligands: GQX.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.25, A:V.34, A:F.79, A:V.86 Hydrogen bonds: A:P.24, A:N.80 Water bridges: A:V.29 pi-Stacking: A:W.23 GQX.2: 7 residues within 4Å: Chain A: E.27, P.28, V.29, N.30, L.33, V.34 Ligands: GQX.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:P.28, A:N.30, A:N.30 Salt bridges: A:E.27

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalle Vedove, A. et al., Identification of a BAZ2A-Bromodomain Hit Compound by Fragment Growing. Acs Med.Chem.Lett. (2022)

Release Date

2022-09-28

Peptides

Bromodomain adjacent to zinc finger domain protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2A

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