SMTL ID : 7qzi.1

BAZ2A bromodomain in complex with acetylpyrrole derivative compound 113

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

1 x GHL: (2~{R})-~{N}-(2,2-dimethylpropyl)-1-[4-(4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrol-2-yl)-1,3-thiazol-2-yl]piperazine-2-carboxamide(Non-covalent)

GHL.1: 11 residues within 4Å: Chain A: W.23, P.24, F.25, V.29, L.33, V.34, Y.37, F.79, N.80, V.86 Ligands: EDO.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.25, A:V.34, A:Y.37, A:F.79, A:V.86 Hydrogen bonds: A:P.24, A:N.80 pi-Stacking: A:W.23

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: V.29, N.30, V.34 Ligands: GHL.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.30

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalle Vedove, A. et al., Identification of a BAZ2A-Bromodomain Hit Compound by Fragment Growing. Acs Med.Chem.Lett. (2022)

Release Date

2022-09-28

Peptides

Bromodomain adjacent to zinc finger domain protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2A

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