SMTL ID : 7r01.1

BAZ2A bromodomain in complex with N-acetylpiperazine derivative fragment 18

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

monomer

Ligands

1 x GI7: 1-[4-(4-ethanoylpiperazin-1-yl)phenyl]guanidine(Non-covalent)

GI7.1: 7 residues within 4Å: Chain A: P.24, V.29, V.34, Y.37, N.80, V.86 Ligands: EDO.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.29 Hydrogen bonds: A:N.80

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: P.28, V.29, N.30, V.34 Ligands: GI7.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.28, A:N.30

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 1 residues within 4Å: Chain A: D.74 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalle Vedove, A. et al., Identification of a BAZ2A-Bromodomain Hit Compound by Fragment Growing. Acs Med.Chem.Lett. (2022)

Release Date

2022-09-28

Peptides

Bromodomain adjacent to zinc finger domain protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2A

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