SMTL ID : 7r53.1

Crystal structure of human TLR8 in complex with Compound 15

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.12 Å
Oligo State
homo-dimer
Ligands
4 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
12 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x I5N: 5-cyclopropyl-6-(2,6-dimethylpyridin-4-yl)-~{N}-[(3~{R},4~{R})-3-fluoranylpiperidin-4-yl]-1~{H}-indazol-3-amine(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Betschart, C. et al., Structure-Based Optimization of a Fragment-like TLR8 Binding Screening Hit to an In Vivo Efficacious TLR7/8 Antagonist. Acs Med.Chem.Lett. (2022)
Release Date
2022-03-23
Peptides
Toll-like receptor 8: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Toll-like receptor 8

Related Entries With Identical Sequence

6ty5.1 | 6ty5.2 | 7r52.1 | 7r54.1 | 8pfi.1