SMTL ID : 7r7d.2 (1 other biounit)

Structure of human SHP2 in complex with compound 22

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x 37I: 4-[6-(4-amino-4-methylpiperidin-1-yl)-1H-pyrazolo[3,4-b]pyrazin-3-yl]-3-chloro-N-methylpyridin-2-amine(Non-covalent)

37I.1: 14 residues within 4Å: Chain A: T.114, E.116, R.117, F.119, T.224, T.225, E.256, T.259, L.260, Q.263, D.495, P.497, K.498, Q.501 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:P.497, A:P.497 Hydrogen bonds: A:E.256, A:T.259 Water bridges: A:R.117, A:T.224 pi-Cation interactions: A:R.117

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 2 residues within 4Å: Chain A: T.18, G.19 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czako, B. et al., Discovery of 6-[(3 S ,4 S )-4-Amino-3-methyl-2-oxa-8-azaspiro[4.5]decan-8-yl]-3-(2,3-dichlorophenyl)-2-methyl-3,4-dihydropyrimidin-4-one (IACS-15414), a Potent and Orally Bioavailable SHP2 Inhibitor. J.Med.Chem. (2021)

Release Date

2021-10-27

Peptides

Tyrosine-protein phosphatase non-receptor type 11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein phosphatase non-receptor type 11

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