SMTL ID : 7rb3.1

Cryo-EM structure of human binary NatC complex with a Bisubstrate inhibitor

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x CMC: CARBOXYMETHYL COENZYME *A(Non-covalent)

CMC.1: 16 residues within 4Å: Chain B: A.75, M.76, L.77, A.78, V.79, R.84, R.85, N.86, G.87, I.88, G.89, T.90, E.111, S.118, L.122 Ligands: MET.2 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.122 Hydrogen bonds: B:L.77, B:R.84, B:R.85, B:N.86, B:G.87, B:G.89, B:T.90

1 x MET: METHIONINE(Non-covalent)

MET.2: 5 residues within 4Å: Chain B: A.75, E.111, Y.138 Ligands: CMC.1, LEU.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Y.138

1 x LEU: LEUCINE(Non-covalent)

LEU.3: 3 residues within 4Å: Chain B: Y.73, A.75 Ligands: MET.2 1 PLIP interactions: 1 interactions with chain B, Hydrophobic interactions: B:Y.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deng, S. et al., Molecular role of NAA38 in thermostability and catalytic activity of the human NatC N-terminal acetyltransferase. Structure (2023)

Release Date

2023-01-11

Peptides

N-alpha-acetyltransferase 35, NatC auxiliary subunit: A
N-alpha-acetyltransferase 30: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

N-alpha-acetyltransferase 35, NatC auxiliary subunit

N-alpha-acetyltransferase 30

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