SMTL ID : 7rio.1

human PXR LBD bound to GSK003

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.48 Å

Oligo State

monomer

Ligands

1 x 5YX: N-[3-(2-tert-butyl-5-{2-[2-(methanesulfonyl)ethyl]pyrimidin-4-yl}-1,3-thiazol-4-yl)-2-fluorophenyl]-2,5-difluorobenzene-1-sulfonamide(Non-covalent)

5YX.1: 19 residues within 4Å: Chain A: L.70, L.73, L.103, L.104, M.107, S.111, F.115, F.145, Q.149, F.152, W.163, Y.170, M.187, H.271, R.274, L.275, F.284, M.289, F.293 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.73, A:F.145, A:F.145, A:F.152, A:W.163, A:W.163, A:Y.170, A:L.275, A:F.284 Hydrogen bonds: A:S.111, A:S.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ramanjulu, J.M. et al., Overcoming the Pregnane X Receptor Liability: Rational Design to Eliminate PXR-Mediated CYP Induction. Acs Med.Chem.Lett. (2021)

Release Date

2021-08-25

Peptides

Isoform 1C of Nuclear receptor subfamily 1 group I member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isoform 1C of Nuclear receptor subfamily 1 group I member 2

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