SMTL ID : 7rjz.1

BthTX-II variant a, from Bothrops jararacussu venom, complexed with benzoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x BEZ: BENZOIC ACID(Non-covalent)

BEZ.1: 6 residues within 4Å: Chain A: F.5, Y.21, T.22, C.28, C.44 Chain B: F.18 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.5, B:F.18 Water bridges: A:G.31 BEZ.2: 7 residues within 4Å: Chain A: F.18 Chain B: F.5, I.9, Y.21, T.22, C.28, C.44 6 PLIP interactions: 1 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:F.18, B:F.5, B:I.9, B:Y.21 Hydrogen bonds: B:C.28 Water bridges: B:G.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Borges, R.J. et al., BthTX-II from Bothrops jararacussu venom has variants with different oligomeric assemblies: An example of snake venom phospholipases A 2 versatility. Int.J.Biol.Macromol. (2021)

Release Date

2022-01-05

Peptides

BthTX-IIa: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

BthTX-IIa