- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 4 x UTP: URIDINE 5'-TRIPHOSPHATE(Non-covalent)
- 4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
ATP.2: 23 residues within 4Å:- Chain A: S.12, G.13, I.14, G.15, K.16, G.17, V.18, H.55, L.69, D.70, N.73, R.215, V.242, D.244, V.245, T.248, V.251, D.317, L.320, K.324
- Chain D: H.187
- Ligands: UTP.1, MG.3
12 PLIP interactions:11 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:G.13, A:I.14, A:G.15, A:K.16, A:G.17, A:V.18, A:R.215, A:D.244, A:V.245, D:H.187
- Salt bridges: A:K.16, A:K.16
ATP.6: 23 residues within 4Å:- Chain B: S.12, G.13, I.14, G.15, K.16, G.17, V.18, H.55, L.69, D.70, N.73, R.215, V.242, D.244, V.245, T.248, V.251, D.317, L.320, K.324
- Chain C: H.187
- Ligands: UTP.5, MG.7
12 PLIP interactions:11 interactions with chain B, 1 interactions with chain C- Hydrogen bonds: B:G.13, B:I.14, B:G.15, B:K.16, B:G.17, B:V.18, B:R.215, B:D.244, B:V.245, C:H.187
- Salt bridges: B:K.16, B:K.16
ATP.11: 23 residues within 4Å:- Chain B: H.187
- Chain C: S.12, G.13, I.14, G.15, K.16, G.17, V.18, H.55, L.69, D.70, N.73, R.215, V.242, D.244, V.245, T.248, V.251, D.317, L.320, K.324
- Ligands: UTP.10, MG.12
12 PLIP interactions:11 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:G.13, C:I.14, C:G.15, C:K.16, C:G.17, C:V.18, C:R.215, C:D.244, C:V.245, B:H.187
- Salt bridges: C:K.16, C:K.16
ATP.15: 23 residues within 4Å:- Chain A: H.187
- Chain D: S.12, G.13, I.14, G.15, K.16, G.17, V.18, H.55, L.69, D.70, N.73, R.215, V.242, D.244, V.245, T.248, V.251, D.317, L.320, K.324
- Ligands: UTP.14, MG.16
12 PLIP interactions:11 interactions with chain D, 1 interactions with chain A- Hydrogen bonds: D:G.13, D:I.14, D:G.15, D:K.16, D:G.17, D:V.18, D:R.215, D:D.244, D:V.245, A:H.187
- Salt bridges: D:K.16, D:K.16
- 8 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 6 residues within 4Å:- Chain A: K.16, G.17, K.38, D.70, E.146
- Ligands: ATP.2
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:D.70, A:D.70
MG.4: 3 residues within 4Å:- Chain A: K.191, K.227
- Ligands: UTP.14
No protein-ligand interaction detected (PLIP)MG.7: 6 residues within 4Å:- Chain B: K.16, G.17, K.38, D.70, E.146
- Ligands: ATP.6
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:D.70, B:D.70
MG.8: 3 residues within 4Å:- Chain B: K.191, K.227
- Ligands: UTP.10
No protein-ligand interaction detected (PLIP)MG.9: 3 residues within 4Å:- Chain C: K.191, K.227
- Ligands: UTP.5
No protein-ligand interaction detected (PLIP)MG.12: 6 residues within 4Å:- Chain C: K.16, G.17, K.38, D.70, E.146
- Ligands: ATP.11
2 PLIP interactions:2 interactions with chain C- Metal complexes: C:D.70, C:D.70
MG.13: 3 residues within 4Å:- Chain D: K.191, K.227
- Ligands: UTP.1
No protein-ligand interaction detected (PLIP)MG.16: 6 residues within 4Å:- Chain D: K.16, G.17, K.38, D.70, E.146
- Ligands: ATP.15
2 PLIP interactions:2 interactions with chain D- Metal complexes: D:D.70, D:D.70
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hansen, J.M. et al., Cryo-EM structures of CTP synthase filaments reveal mechanism of pH-sensitive assembly during budding yeast starvation. Elife (2021)
- Release Date
- 2021-11-24
- Peptides
- CTP synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
AC
BD
C
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 4 x UTP: URIDINE 5'-TRIPHOSPHATE(Non-covalent)
- 4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 8 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hansen, J.M. et al., Cryo-EM structures of CTP synthase filaments reveal mechanism of pH-sensitive assembly during budding yeast starvation. Elife (2021)
- Release Date
- 2021-11-24
- Peptides
- CTP synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
AC
BD
C