SMTL ID : 7rlt.1

Structure of ligand-free ALDH1L1 (10-formyltetrahydrofolate dehydrogenase)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.70 Å

Oligo State

homo-tetramer

Ligands

4 x PNS: 4'-PHOSPHOPANTETHEINE(Covalent)

PNS.1: 16 residues within 4Å: Chain A: K.520, T.521, M.525, N.574, Y.575, M.578, W.582, F.701, N.706, C.707, N.864, K.865, T.866 Chain B: S.354, V.355 Chain C: A.550 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:K.520, A:F.701 Hydrogen bonds: A:N.706, A:N.864, A:T.866, A:T.866, A:T.866, B:S.354 Salt bridges: A:K.520, A:K.865 PNS.2: 16 residues within 4Å: Chain A: S.354, V.355 Chain B: K.520, T.521, M.525, Y.575, M.578, W.582, F.701, N.706, C.707, I.708, N.864, K.865, T.866 Chain D: A.550 10 PLIP interactions: 9 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:K.520, B:F.701 Hydrogen bonds: B:N.706, B:N.864, B:T.866, B:T.866, B:T.866, A:S.354 Salt bridges: B:K.520, B:K.865 PNS.3: 16 residues within 4Å: Chain A: A.550 Chain C: K.520, T.521, M.525, Y.575, M.578, W.582, F.701, N.706, C.707, I.708, N.864, K.865, T.866 Chain D: S.354, V.355 9 PLIP interactions: 8 interactions with chain C, 1 interactions with chain D Hydrophobic interactions: C:K.520, C:F.701 Hydrogen bonds: C:N.706, C:N.864, C:T.866, C:T.866, D:S.354 Salt bridges: C:K.520, C:K.865 PNS.4: 16 residues within 4Å: Chain B: A.550 Chain C: S.354, V.355 Chain D: K.520, T.521, M.525, Y.575, M.578, W.582, F.701, N.706, C.707, I.708, N.864, K.865, T.866 9 PLIP interactions: 8 interactions with chain D, 1 interactions with chain C Hydrophobic interactions: D:K.520, D:F.701 Hydrogen bonds: D:N.706, D:N.864, D:T.866, D:T.866, C:S.354 Salt bridges: D:K.520, D:K.865

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsybovsky, Y. et al., Structure of putative tumor suppressor ALDH1L1. Commun Biol (2022)

Release Date

2022-01-12

Peptides

Cytosolic 10-formyltetrahydrofolate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
B

D
D

Cytosolic 10-formyltetrahydrofolate dehydrogenase