SMTL ID : 7rn6.1

High-resolution crystal structure of human JAK2 kinase domain (JH1) bound to type-II inhibitor BBT594

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x 046: 5-{[6-(acetylamino)pyrimidin-4-yl]oxy}-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-2,3-dihydro-1H-indole-1-carboxamide(Non-covalent)

046.1: 27 residues within 4Å: Chain A: L.21, V.29, A.46, K.48, E.64, I.67, L.68, L.71, I.76, V.77, L.93, M.95, E.96, Y.97, L.98, P.99, G.101, L.133, Y.138, I.139, H.140, R.141, L.149, I.158, G.159, D.160, F.161 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.21, A:L.21, A:V.29, A:K.48, A:E.64, A:L.68, A:L.93, A:Y.97, A:F.161 Hydrogen bonds: A:E.64, A:E.64, A:L.98, A:L.98, A:D.160 pi-Cation interactions: A:H.140 Halogen bonds: A:I.158

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: R.63, K.136, R.137, Y.138 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.63, A:K.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, M.R. et al., High-resolution crystal structure of human JAK2 kinase domain (JH1) bound to type-II inhibitor BBT594. To Be Published

Release Date

2021-11-03

Peptides

Tyrosine-protein kinase JAK2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase JAK2