SMTL ID : 7rrm.1 (1 other biounit)

Structure of the human TMED1 (p24gamma1) Golgi dynamics Domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

homo-dimer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 6 residues within 4Å: Chain A: K.48, Q.49, C.50, Y.52 Chain B: Y.52, D.107 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:C.50, A:C.50, A:Y.52, A:Y.52 Hydrophobic interactions: B:Y.52

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 1 residues within 4Å: Chain B: Q.83 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mota, D.C.A.M. et al., Structural and thermodynamic analyses of human TMED1 (p24 gamma 1) Golgi dynamics. Biochimie (2022)

Release Date

2021-10-20

Peptides

Transmembrane emp24 domain-containing protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
A

Transmembrane emp24 domain-containing protein 1

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