SMTL ID : 7rsf.1

Acetylornithine deacetylase from Escherichia coli

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.83, D.115, E.147, E.148, E.172 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.83, A:D.115, A:E.172, A:E.172, H2O.3 ZN.4: 5 residues within 4Å: Chain B: H.83, D.115, E.147, E.148, E.172 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.83, B:D.115, B:E.172, B:E.172, H2O.5

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: H.302 Chain B: A.252, S.253 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.253, B:S.253 GOL.3: 3 residues within 4Å: Chain A: S.253 Chain B: L.301, H.302 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Water bridges: B:H.263 Hydrogen bonds: A:S.253, A:S.253

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 3 residues within 4Å: Chain B: F.235, T.236, N.332 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., Acetylornithine deacetylase from Escherichia coli. To Be Published

Release Date

2021-08-18

Peptides

Acetylornithine deacetylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Acetylornithine deacetylase