SMTL ID : 7rym.1

CD1a-endo-gdTCR complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 3 residues within 4Å: Chain A: Q.117, D.124 Chain B: K.61 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.117

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: G.235, D.236, R.248 Chain B: Q.11 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:D.236, A:D.236, A:D.236, B:Q.11 Salt bridges: A:R.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wegrecki, M. et al., Atypical sideways recognition of CD1a by autoreactive gamma delta T cell receptors. Nat Commun (2022)

Release Date

2022-05-18

Peptides

T-cell surface glycoprotein CD1a: A
Beta-2-microglobulin: B
T cell receptor gamma variable 4,T cell receptor beta constant 1: C
T cell receptor delta variable 1,T cell receptor alpha chain constant: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

T-cell surface glycoprotein CD1a

Beta-2-microglobulin

T cell receptor gamma variable 4,T cell receptor beta constant 1

T cell receptor delta variable 1,T cell receptor alpha chain constant

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