SMTL ID : 7s15.1

GLP-1 receptor bound with Pfizer small molecule agonist

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x 82L: 2-[(4-{6-[(2,4-difluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-[(1-ethyl-1H-imidazol-5-yl)methyl]-1H-benzimidazole-6-carboxylic acid(Non-covalent)

82L.1: 16 residues within 4Å: Chain A: S.8, L.9, W.10, L.118, K.174, L.178, W.180, L.194, Q.198, C.203, F.207, M.210, R.357, F.358, L.361, F.362 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.9, A:L.118, A:K.174, A:L.178, A:W.180, A:L.194, A:F.207, A:F.207, A:L.361 Hydrogen bonds: A:K.174, A:Q.198, A:Q.211 Salt bridges: A:R.357 pi-Stacking: A:W.10 pi-Cation interactions: A:W.180, A:F.358

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Griffith, D.A. et al., A Small-Molecule Oral Agonist of the Human Glucagon-like Peptide-1 Receptor. J.Med.Chem. (2022)

Release Date

2022-06-08

Peptides

Glucagon-like peptide 1 receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

Membrane

We predict this structure to be a membrane protein.
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Glucagon-like peptide 1 receptor