SMTL ID : 7s26.1 (1 other biounit)

ROCK1 IN COMPLEX WITH LIGAND G5018

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.74 Å

Oligo State

homo-dimer

Ligands

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 7 residues within 4Å: Chain A: K.18, E.20, W.118, E.119, R.121, D.122 Chain B: R.54 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.18 Salt bridges: A:E.20, A:E.20, A:D.122, A:D.122 EPE.3: 6 residues within 4Å: Chain A: R.54 Chain B: K.18, E.20, W.118, R.121, D.122 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.18, B:W.118 Salt bridges: B:D.122, B:D.122

2 x 86K: 2-[methyl(phenyl)amino]-1-[4-(1H-pyrrolo[2,3-b]pyridin-3-yl)-3,6-dihydropyridin-1(2H)-yl]ethan-1-one(Non-covalent)

86K.2: 22 residues within 4Å: Chain A: I.78, R.80, G.81, F.83, G.84, E.85, V.86, A.99, K.101, L.102, L.103, E.120, M.124, V.133, M.149, E.150, Y.151, M.152, L.201, A.211, D.212, F.364 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.78, A:V.86, A:K.101, A:L.201, A:F.364 Hydrogen bonds: A:E.150, A:M.152 pi-Cation interactions: A:K.101 86K.4: 22 residues within 4Å: Chain B: I.78, R.80, G.81, A.82, F.83, G.84, E.85, V.86, A.99, K.101, L.102, L.103, E.120, V.133, M.149, E.150, Y.151, M.152, L.201, A.211, D.212, F.364 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:I.78, B:V.86, B:V.86, B:K.101, B:L.103, B:L.201, B:F.364 Hydrogen bonds: B:E.150, B:M.152 pi-Cation interactions: B:K.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Beroza, P. et al., Chemical space docking enables large-scale structure-based virtual screening to discover ROCK1 kinase inhibitors. Nat Commun (2022)

Release Date

2022-10-05

Peptides

Rho-associated protein kinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Rho-associated protein kinase 1

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