SMTL ID : 7s76.1 (2 other biounits)

HBV CAPSID Y132A WITH COMPOUND 10b AT 2.5A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x 8EI: (1-methyl-1H-1,2,4-triazol-3-yl)methyl {(4S)-1-[(3-chloro-4-fluorophenyl)carbamoyl]-2-methyl-2,4,5,6-tetrahydrocyclopenta[c]pyrrol-4-yl}carbamate(Non-covalent)

8EI.1: 13 residues within 4Å: Chain A: F.26, P.28, D.32, L.33, T.36, W.105, I.108, S.109, F.113, Y.121, I.142, L.143, S.144 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:P.28, A:I.108, A:F.113 Hydrogen bonds: A:L.143, A:S.144 Halogen bonds: A:D.32 8EI.2: 12 residues within 4Å: Chain B: F.26, P.28, D.32, L.33, T.36, W.105, I.108, S.109, Y.121, I.142, L.143, S.144 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:P.28, B:I.108 Hydrogen bonds: B:L.143, B:S.144 Halogen bonds: B:D.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cole, A.G. et al., The identification of highly efficacious functionalised tetrahydrocyclopenta[ c ]pyrroles as inhibitors of HBV viral replication through modulation of HBV capsid assembly. Rsc Med Chem (2022)

Release Date

2022-05-04

Peptides

Capsid protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Capsid protein

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