SMTL ID : 7s9z.1

Helicobacter Hepaticus CcsBA Closed Conformation

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x PTY: PHOSPHATIDYLETHANOLAMINE(Non-covalent)

PTY.1: 16 residues within 4Å: Chain A: Y.22, R.42, E.52, H.55, F.86, I.89, I.90, A.93, G.94, I.95, R.97, Y.98, F.823, R.835, W.837 Ligands: HEB.2 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.22, A:H.55, A:F.86, A:I.89, A:I.90, A:A.93, A:I.95, A:Y.98, A:F.823 Hydrogen bonds: A:R.42, A:R.835 Salt bridges: A:R.97, A:R.97

1 x HEB: HEME B/C(Non-covalent)

HEB.2: 18 residues within 4Å: Chain A: M.12, V.15, I.19, L.62, F.66, S.69, R.74, K.76, S.79, H.83, F.86, L.324, R.331, L.815, F.816, H.858, F.861 Ligands: PTY.1 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:V.15, A:I.19, A:L.62, A:F.86, A:F.86, A:L.324, A:L.815, A:F.816, A:F.861 Hydrogen bonds: A:S.69 Salt bridges: A:R.74, A:K.76, A:R.331 pi-Stacking: A:F.66 pi-Cation interactions: A:H.858 Metal complexes: A:H.83, A:H.858

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mendez, D.L. et al., Cryo-EM of CcsBA reveals the basis for cytochrome c biogenesis and heme transport. Nat.Chem.Biol. (2022)

Release Date

2021-12-22

Peptides

Cytochrome c biogenesis protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Cytochrome c biogenesis protein

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