SMTL ID : 7se7.1

Crystal structure of human Fibrillarin in complex with S-adenosyl-L-methionine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 23 residues within 4Å: Chain A: S.63, Y.86, G.88, A.89, A.90, T.93, T.94, V.95, V.111, E.112, F.113, S.114, S.117, E.136, D.137, A.138, R.139, F.155, D.157, V.158, A.159, Q.160, I.166 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:A.90 Hydrogen bonds: A:Y.86, A:A.90, A:T.93, A:T.94, A:T.94, A:E.112, A:F.113, A:D.137, A:A.138, A:D.157, A:Q.160 Water bridges: A:G.92, A:T.93 Salt bridges: A:D.157 pi-Stacking: A:F.113, A:F.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, Y. et al., Discovery of Cofactor Competitive Inhibitors against the Human Methyltransferase Fibrillarin. Pharmaceuticals (2021)

Release Date

2022-02-09

Peptides

rRNA 2'-O-methyltransferase fibrillarin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

rRNA 2'-O-methyltransferase fibrillarin

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