SMTL ID : 7seh.1

Glucose-6-phosphate 1-dehydrogenase (K403QdLtL)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 18 residues within 4Å: Chain A: S.44, G.45, D.46, L.47, A.75, R.76, S.77, Y.116, A.145, L.146, P.147, P.148, V.150, E.174, K.175, P.176, Y.206, Y.253 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.206, A:Y.253 Hydrogen bonds: A:S.44, A:S.44, A:D.46, A:L.47, A:R.76, A:R.76, A:S.77, A:Y.116, A:Y.116, A:L.146, A:Y.253 Salt bridges: A:R.76 NAP.2: 18 residues within 4Å: Chain B: S.44, G.45, D.46, L.47, A.75, R.76, S.77, Y.116, A.145, L.146, P.147, P.148, V.150, E.174, K.175, P.176, Y.206, Y.253 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:Y.206, B:Y.253 Hydrogen bonds: B:S.44, B:D.46, B:L.47, B:R.76, B:R.76, B:R.76, B:S.77, B:Y.116, B:L.146, B:Y.253 Water bridges: B:A.48 Salt bridges: B:R.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garcia, A.A. et al., Stabilization of glucose-6-phosphate dehydrogenase oligomers enhances catalytic activity and stability of clinical variants. J.Biol.Chem. (2022)

Release Date

2022-08-17

Peptides

Glucose-6-phosphate 1-dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucose-6-phosphate 1-dehydrogenase