SMTL ID : 7sex.1

M. tb EgtD in complex with TGX221

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 93I: 7-methyl-2-morpholin-4-yl-9-[(1~{R})-1-phenylazanylethyl]-3~{H}-pyrido[1,2-a]pyrimidin-4-one(Non-covalent)

93I.1: 13 residues within 4Å: Chain A: K.36, Y.39, F.47, Y.56, D.113, G.161, S.162, T.163, N.166, L.167, Y.206, E.282, S.284 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.36, A:F.47, A:T.163, A:N.166, A:L.167 Hydrogen bonds: A:Y.56, A:N.166, A:S.284 pi-Stacking: A:Y.39

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 10 residues within 4Å: Chain A: Y.39, F.47, I.50, Y.56, A.205, Y.206, T.213, F.216, M.252, E.282 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.39, A:Y.39, A:E.282 GOL.3: 6 residues within 4Å: Chain A: E.64, A.68, R.69, T.308, D.309, E.310 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.64, A:R.69, A:R.69, A:E.310, A:E.310

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sudasinghe, T.D. et al., Inhibitors of Mycobacterium tuberculosis EgtD target both substrate binding sites to limit hercynine production. Sci Rep (2021)

Release Date

2021-12-01

Peptides

Histidine N-alpha-methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histidine N-alpha-methyltransferase

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