SMTL ID : 7si4.1

CRYSTAL STRUCTURE OF EED WITH MRTX-2219

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x 9JL: (4S)-8-{4-[(dimethylamino)methyl]-2-methylphenyl}-5-{[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]amino}imidazo[1,2-c]pyrimidine-2-carbonitrile(Non-covalent)

9JL.1: 14 residues within 4Å: Chain A: P.56, F.58, N.107, Y.109, N.155, K.172, E.199, L.201, D.271, Y.326, M.327, R.328, R.375, D.391 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.58, A:F.58, A:F.58, A:Y.109, A:D.271, A:Y.326, A:R.328 Hydrogen bonds: A:N.155 Water bridges: A:Y.109, A:Y.326 Salt bridges: A:D.391 pi-Stacking: A:Y.109, A:Y.109, A:Y.326, A:Y.326, A:Y.326 pi-Cation interactions: A:R.328

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 4 residues within 4Å: Chain A: C.45, N.47, S.48, H.367 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.48 Water bridges: A:S.48, A:S.48 FMT.3: 3 residues within 4Å: Chain A: S.320, K.346, Y.348 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.320, A:K.346, A:Y.348 Water bridges: A:K.346

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burns, A.C., CRYSTAL STRUCTURE OF EED WITH MRTX-2219. TO BE PUBLISHED

Release Date

2022-11-09

Peptides

Polycomb protein EED: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polycomb protein EED

Related Entries With Identical Sequence