SMTL ID : 7sj3.1

Structure of CDK4-Cyclin D3 bound to abemaciclib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 6ZV: N-{5-[(4-ethylpiperazin-1-yl)methyl]pyridin-2-yl}-5-fluoro-4-[4-fluoro-2-methyl-1-(propan-2-yl)-1H-benzimidazol-6-yl]py rimidin-2-amine(Non-covalent)

6ZV.1: 17 residues within 4Å: Chain A: I.12, Y.17, V.20, A.33, K.35, E.56, V.72, F.93, E.94, V.96, D.97, Q.98, D.99, E.144, N.145, L.147, D.158 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.12, A:Y.17, A:V.20, A:V.20 Hydrogen bonds: A:V.96, A:V.96 Salt bridges: A:D.99 pi-Stacking: A:F.93 Halogen bonds: A:E.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hilgers, M.T. et al., Structure of CDK4-Cyclin D3 bound to abemaciclib. To Be Published

Release Date

2022-11-02

Peptides

Cyclin-dependent kinase 4: A
G1/S-specific cyclin-D3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cyclin-dependent kinase 4

G1/S-specific cyclin-D3