SMTL ID : 7spa.1

Chlorella virus Hyaluronan Synthase in the GlcNAc-primed, channel-open state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.1: 4 residues within 4Å: Chain C: G.271, Y.300, R.304, W.343 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:Y.300, C:Y.300 Salt bridges: C:R.257

1 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)

Y01.2: 8 residues within 4Å: Chain C: Y.47, Y.378, S.405, Y.433, F.436, V.487, G.491 Ligands: 3PE.3 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:Y.433, C:F.436 Hydrogen bonds: C:Y.378, C:S.405

1 x 3PE: 1,2-Distearoyl-sn-glycerophosphoethanolamine(Non-covalent)

3PE.3: 9 residues within 4Å: Chain A: Y.100 Chain C: I.395, Q.398, S.494, I.495, W.499, Y.500, F.501 Ligands: Y01.2 7 PLIP interactions: 4 interactions with chain C, 3 interactions with chain A Hydrophobic interactions: C:I.395, C:I.495, C:F.501, C:F.501, A:Y.100, A:Y.100 Hydrogen bonds: A:Y.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maloney, F.P. et al., Structure, substrate recognition and initiation of hyaluronan synthase. Nature (2022)

Release Date

2022-04-06

Peptides

Nanobody 872: A
Nanobody 881: B
Hyaluronan synthase: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
A

Membrane

We predict this structure to be a membrane protein.
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Nanobody 872

Nanobody 881

Hyaluronan synthase

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