SMTL ID : 7srq.1

5-HT2B receptor bound to LSD obtained by cryo-electron microscopy (cryoEM)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.166, N.168, N.169 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.166, A:N.168

1 x 7LD: (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide(Non-covalent)

7LD.2: 8 residues within 4Å: Chain A: L.97, D.100, S.104, T.105, W.243, F.246, N.250, V.272 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.97, A:F.246, A:V.272 Salt bridges: A:D.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cao, C. et al., Signaling snapshots of a serotonin receptor activated by the prototypical psychedelic LSD. Neuron (2022)

Release Date

2022-09-21

Peptides

5-hydroxytryptamine receptor 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

Membrane

We predict this structure to be a membrane protein.
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5-hydroxytryptamine receptor 2B