SMTL ID : 7suu.1 (1 other biounit)

Crystal Structure of Mouse Cadherin-23 EC25-26

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: N.6, N.8, D.40, D.42, N.46, D.96 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.8, A:D.40, A:D.42, A:N.46, A:D.96 CA.2: 6 residues within 4Å: Chain A: E.25, E.26, D.81, E.83, D.118 Ligands: CA.3 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.25, A:E.26, A:D.81, A:E.83, A:D.118, H2O.3 CA.3: 8 residues within 4Å: Chain A: E.25, E.83, D.115, I.116, D.118, N.119, D.158 Ligands: CA.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.25, A:D.115, A:I.116, A:D.118, A:D.158 CA.4: 5 residues within 4Å: Chain A: D.117, N.119, D.156, D.158, N.162 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.117, A:N.119, A:D.158, A:N.162, H2O.1 CA.5: 5 residues within 4Å: Chain A: E.140, E.195, D.239, I.240, D.242 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.140, A:E.195, A:D.239, A:I.240, A:D.242 CA.6: 5 residues within 4Å: Chain A: E.140, H.141, D.193, E.195, D.242 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.140, A:H.141, A:D.193, A:E.195, A:D.242

1 x K: POTASSIUM ION(Non-covalent)

K.7: 2 residues within 4Å: Chain A: T.137, V.148 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.137, A:V.148, H2O.2, H2O.3

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 3 residues within 4Å: Chain A: R.194, E.238, D.239 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boyer, M.D. et al., Crystal Structure of Mouse Cadherin-23 EC25-26. to be published

Release Date

2022-11-30

Peptides

Cadherin-23: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cadherin-23

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