SMTL ID : 7t0w.1

Complex of GABA-A synaptic receptor with autoimmune antibody Fab115

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-1-2-2-mer
Ligands
4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Noviello, C.M. et al., Structural mechanisms of GABA A receptor autoimmune encephalitis. Cell (2022)
Release Date
2022-07-13
Peptides
Gamma-aminobutyric acid receptor subunit beta-2: AC
Gamma-aminobutyric acid receptor subunit alpha-1: BD
Gamma-aminobutyric acid receptor subunit gamma-2: E
Fab115 light chain, IgG1: FI
Fab115 Heavy Chain, IgG1: GH
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
C
B
B
D
D
E
E
F
L2
I
L
G
H
H
H2
Membrane
We predict this structure to be a membrane protein.

Gamma-aminobutyric acid receptor subunit beta-2

Toggle Identical (AC)

Gamma-aminobutyric acid receptor subunit alpha-1

Toggle Identical (BD)

Gamma-aminobutyric acid receptor subunit gamma-2

Fab115 light chain, IgG1

Toggle Identical (FI)

Fab115 Heavy Chain, IgG1

Toggle Identical (GH)

Related Entries With Identical Sequence

6d6u.1 | 7t0z.1