SMTL ID : 7t25.1 (1 other biounit)

OspA-Fab 319-44 complex structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

hetero-1-1-1-mer

Ligands

13 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: N.158, A.161, L.162 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: I.76, Y.80 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: W.47, Y.60 Chain B: S.95, P.96 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain A: I.28 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain A: K.74, S.75 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain A: S.130 Chain B: F.117, I.118 Ligand excluded by PLIP CL.9: 2 residues within 4Å: Chain B: P.41, A.85 Ligand excluded by PLIP CL.10: 2 residues within 4Å: Chain B: S.115, N.138 Ligand excluded by PLIP CL.14: 3 residues within 4Å: Chain C: K.216, Q.230, A.254 Ligand excluded by PLIP CL.15: 3 residues within 4Å: Chain C: K.86, E.87, D.88 Ligand excluded by PLIP CL.16: 2 residues within 4Å: Chain C: K.164, K.252 Ligand excluded by PLIP CL.17: 3 residues within 4Å: Chain C: T.72, Q.79, T.81 Ligand excluded by PLIP

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.7: 3 residues within 4Å: Chain A: T.31, Y.52, N.54 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:T.31 Hydrogen bonds: A:N.54

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.11: 2 residues within 4Å: Chain B: E.1, P.96 Ligand excluded by PLIP IOD.12: 2 residues within 4Å: Chain B: D.186, K.189 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.13: 6 residues within 4Å: Chain A: L.45, E.46, W.47 Chain B: L.97, T.98, F.99 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:F.99, B:F.99, A:W.47, A:W.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rudolph, M.J., Structural analysis of OspA-31944 complex. To Be Published

Release Date

2022-12-14

Peptides

319-44 Fab heavy chain: A
319-44 Fab light chain: B
Outer surface protein A: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
E

319-44 Fab heavy chain

319-44 Fab light chain

Outer surface protein A

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