SMTL ID : 7t3n.1

R184Q/E191Q mutant of rat vesicular glutamate transporter 2 (VGLUT2)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.00 Å

Oligo State

monomer

Ligands

1 x C5B: (1S,3R)-1-AMINOCYCLOPENTANE-1,3-DICARBOXYLIC ACID(Non-covalent)

C5B.1: 11 residues within 4Å: Chain A: F.85, R.88, Y.135, Y.195, Y.223, R.322, S.323, F.326, Y.327, N.431, N.450 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.195, A:F.326 Hydrogen bonds: A:Y.135, A:Y.195, A:Y.195, A:Y.223, A:R.322, A:Y.327, A:N.431 Salt bridges: A:R.88, A:R.322

1 x I7Y: (2R)-2-(methoxymethyl)-4-{[(25R)-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside(Non-covalent)

I7Y.2: 14 residues within 4Å: Chain A: P.68, R.70, Y.71, G.78, L.79, E.210, T.217, C.220, G.221, A.224, I.228, E.277, E.278, Y.281 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:T.217, A:A.224, A:I.228 Hydrogen bonds: A:R.70, A:R.70, A:E.210, A:E.277, A:E.278 Salt bridges: A:R.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, F. et al., Substrate Recognition, Directional Flux, and Allostery in a Synaptic Vesicle Glutamate Transporter. To Be Published

Release Date

2022-12-14

Peptides

Vesicular glutamate transporter 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Vesicular glutamate transporter 2