SMTL ID : 7t5f.1 (1 other biounit)

Botulinum neurotoxin Type B Light Chain complexed with nanobodies JLJ-G3 and JNE-B10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.235, E.236, H.239, E.273, Y.378 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.235, A:H.239, A:E.273, A:E.273, H2O.2

4 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 2 residues within 4Å: Chain A: R.128, A.139 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: D.46, R.47 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain B: R.76 Ligand excluded by PLIP IOD.5: 5 residues within 4Å: Chain C: G.57, N.58, G.59, I.61, I.62 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lam, K.H. et al., Probing the structure and function of the protease domain of botulinum neurotoxins using single-domain antibodies. Plos Pathog. (2022)

Release Date

2021-12-29

Peptides

Botulinum neurotoxin type B: A
JLJ-G3: B
JNE-B10: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
B

Botulinum neurotoxin type B

JLJ-G3

JNE-B10

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