SMTL ID : 7t7n.1

Structure of SPCC1393.13 protein from fission yeast

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PG5: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE(Non-covalent)

PG5.1: 5 residues within 4Å: Chain A: R.332, P.333, N.334, L.353, D.356 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.334

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 9 residues within 4Å: Chain A: S.193, L.194, D.253, E.258, K.366, G.367, L.402, R.403, T.404 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.253, A:L.402, A:T.404 Water bridges: A:K.366, A:K.366, A:T.404 Salt bridges: A:K.366

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sanchez, A.M. et al., Fission yeast Duf89 and Duf8901 are cobalt/nickel-dependent phosphatase-pyrophosphatases that act via a covalent aspartyl-phosphate intermediate. J.Biol.Chem. (2022)

Release Date

2022-06-01

Peptides

Damage-control phosphatase SPCC1393.13: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Damage-control phosphatase SPCC1393.13