SMTL ID : 7ta6.5 (7 other biounits)

Trimer-to-Monomer Disruption of Tumor Necrosis Factor-alpha (TNF-alpha) by unnatural alpha/beta-peptide-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.67 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 10 residues within 4Å: Chain A: A.19, N.20, P.21, A.23, E.24, G.25, Q.26, L.143, D.144, A.146 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.23, A:G.25

1 x NH2: AMINO GROUP(Non-functional Binders)

NH2.2: 3 residues within 4Å: Chain B: X.26, C.27, X.29 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:C.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Niu, J. et al., Trimer-to-Monomer Disruption Mechanism for a Potent, Protease-Resistant Antagonist of Tumor Necrosis Factor-alpha Signaling. J.Am.Chem.Soc. (2022)

Release Date

2022-06-29

Peptides

Tumor necrosis factor: A
Alpha/Beta-peptide-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
M

Tumor necrosis factor

Alpha/Beta-peptide-1

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