SMTL ID : 7tb0.2 (3 other biounits)

E. faecium MurAA in complex with fosfomycin and UNAG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)

UD1.1: 20 residues within 4Å: Chain A: K.22, N.23, R.95, A.96, R.124, P.125, I.126, D.127, L.128, H.129, F.163, S.165, V.166, G.167, T.306, D.307, V.329, F.330, R.333 Ligands: FFQ.2 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:A.96 Hydrogen bonds: A:N.23, A:D.127, A:L.128, A:H.129, A:S.165, A:V.166, A:G.167, A:D.307, A:R.333 Water bridges: A:R.95, A:R.95, A:R.95, A:R.95, A:R.124, A:R.124, A:Q.170, A:E.191, A:R.235, A:T.306, A:D.307, A:E.331, A:E.331 Salt bridges: A:R.95, A:R.124

1 x FFQ: [(1R)-1-hydroxypropyl]phosphonic acid(Covalent)

FFQ.2: 11 residues within 4Å: Chain A: K.22, N.23, D.50, R.95, G.118, C.119, I.121, R.124, R.333, R.399 Ligands: UD1.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.121 Hydrogen bonds: A:K.22, A:K.22, A:N.23, A:C.119, A:R.124, A:R.124, A:R.399, A:R.399 Water bridges: A:R.95, A:D.307

1 x K: POTASSIUM ION(Non-covalent)

K.3: 5 residues within 4Å: Chain A: A.120, I.121, Q.335, T.370, D.371 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.370, A:D.371, H2O.5

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 5 residues within 4Å: Chain A: C.119, D.371, L.372, Y.396, R.399 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, Y. et al., Enolpyruvate transferase MurAA A149E , identified during adaptation of Enterococcus faecium to daptomycin, increases stability of MurAA-MurG interaction. J.Biol.Chem. (2023)

Release Date

2022-12-28

Peptides

UDP-N-acetylglucosamine 1-carboxyvinyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

UDP-N-acetylglucosamine 1-carboxyvinyltransferase

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