SMTL ID : 7tbr.1

Crystal structure of the TPM domain from the Rhodothermus marinus protein Rhom172_1776

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

1 x B3P: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

B3P.1: 10 residues within 4Å: Chain A: V.90, F.91, I.92, A.93, T.94, I.102, D.104, A.107, G.108, V.111 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.91 Hydrogen bonds: A:I.92, A:I.92, A:T.94, A:T.94 Water bridges: A:V.90, A:E.99

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: D.16, D.19, L.21, E.26 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.16, A:D.19, A:L.21, A:E.26, H2O.3, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pellizza, L. et al., Crystal structure of the TPM domain from the Rhodothermus marinus protein Rhom172_1776. To be published

Release Date

2023-01-25

Peptides

TPM_phosphatase domain-containing protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TPM_phosphatase domain-containing protein