SMTL ID : 7tcy.1 (1 other biounit)

The ubiquitin-associated domain of human thirty-eight negative kinase I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

monomer

Ligands

3 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 3 residues within 4Å: Chain A: G.1, E.2 Ligands: FMT.7 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.2 FMT.4: 3 residues within 4Å: Chain A: F.46, H.47, R.53 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.53 FMT.7: 5 residues within 4Å: Chain A: G.1, E.2, L.3, Q.4 Ligands: FMT.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.3, A:Q.4

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain A: H.19, Q.20, Q.23 Ligands: MG.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.20 Water bridges: A:Q.20, A:Q.20 Salt bridges: A:H.19

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: H.19, Q.23 Ligands: PO4.2 No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 4 residues within 4Å: Chain A: I.37, R.38, K.41, W.65 Ligand excluded by PLIP CL.6: 1 residues within 4Å: Chain A: R.72 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nawarathnage, S. et al., Fusion crystallization reveals the behavior of both the 1TEL crystallization chaperone and the TNK1 UBA domain. Structure (2023)

Release Date

2023-01-11

Peptides

Non-receptor tyrosine-protein kinase TNK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Non-receptor tyrosine-protein kinase TNK1

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