SMTL ID : 7tdo.1

Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-hexamer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 10 residues within 4Å: Chain A: V.166, G.167, G.207, T.208, G.209, K.210, T.211, H.346, G.370, A.371 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.167, A:G.167, A:G.207, A:T.208, A:G.209, A:K.210, A:T.211, A:T.211, A:T.211 Salt bridges: A:K.210 ADP.2: 10 residues within 4Å: Chain B: V.166, G.167, G.207, T.208, G.209, K.210, T.211, H.346, G.370, A.371 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.167, B:G.167, B:G.207, B:T.208, B:G.209, B:K.210, B:T.211, B:T.211, B:T.211 Salt bridges: B:K.210 ADP.3: 10 residues within 4Å: Chain C: V.166, G.167, G.207, T.208, G.209, K.210, T.211, H.346, G.370, A.371 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:G.167, C:G.167, C:G.207, C:T.208, C:G.209, C:K.210, C:T.211, C:T.211, C:T.211 Salt bridges: C:K.210 ADP.4: 10 residues within 4Å: Chain D: V.166, G.167, G.207, T.208, G.209, K.210, T.211, H.346, G.370, A.371 10 PLIP interactions: 10 interactions with chain D Hydrogen bonds: D:G.167, D:G.167, D:G.207, D:T.208, D:G.209, D:K.210, D:T.211, D:T.211, D:T.211 Salt bridges: D:K.210 ADP.5: 10 residues within 4Å: Chain E: V.166, G.167, G.207, T.208, G.209, K.210, T.211, H.346, G.370, A.371 10 PLIP interactions: 10 interactions with chain E Hydrogen bonds: E:G.167, E:G.167, E:G.207, E:T.208, E:G.209, E:K.210, E:T.211, E:T.211, E:T.211 Salt bridges: E:K.210 ADP.6: 10 residues within 4Å: Chain F: V.166, G.167, G.207, T.208, G.209, K.210, T.211, H.346, G.370, A.371 10 PLIP interactions: 10 interactions with chain F Hydrogen bonds: F:G.167, F:G.167, F:G.207, F:T.208, F:G.209, F:K.210, F:T.211, F:T.211, F:T.211 Salt bridges: F:K.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, W. et al., Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state. Commun Biol (2022)

Release Date

2022-04-06

Peptides

ATP-dependent zinc metalloprotease FtsH: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

ATP-dependent zinc metalloprotease FtsH