SMTL ID : 7toa.1

BRD3-BD1 in complex with RaPID linear peptide 3xAcK.1 (triAcK.1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.41 Å

Oligo State

hetero-2-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: I.45, I.46, K.47, N.48, N.80, I.83 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.45, A:K.47, A:N.48, A:N.48, A:N.80 GOL.2: 6 residues within 4Å: Chain C: I.45, I.46, K.47, N.48, N.80, I.83 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:K.47, C:N.48, C:N.48, C:N.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Low, J.K.K. et al., mRNA display reveals a class of high-affinity bromodomain-binding motifs that are not found in the human proteome. J.Biol.Chem. (2023)

Release Date

2023-01-25

Peptides

Bromodomain-containing protein 3: AC
3xAcK.1 (triAcK.1): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

B
D

Bromodomain-containing protein 3

3xAcK.1 (triAcK.1)