SMTL ID : 7tvb.1

Stat5A Core in Complex with AK305

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

1 x KOC: N-{5-[difluoro(phosphono)methyl]-1-benzothiophene-2-carbonyl}-3-methyl-L-valyl-L-prolyl-N,N-dimethyl-N~3~-[4-(1,3-thiazol-2-yl)phenyl]-beta-alaninamide(Non-covalent)

KOC.1: 15 residues within 4Å: Chain A: K.468, R.486, S.488, D.489, S.490, T.496, N.510, L.511, K.512, P.513, F.514, D.518, L.531, Y.533 Ligands: GOL.3 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.511, A:K.512, A:F.514 Hydrogen bonds: A:K.468, A:R.486, A:R.486, A:D.489, A:S.490, A:S.490, A:N.510, A:K.512 Water bridges: A:S.490, A:S.490, A:K.512, A:R.527 pi-Cation interactions: A:K.512

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: E.305, K.307, T.349, W.352, D.353, V.366, W.423 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.305, A:E.305, A:K.307, A:T.349, A:W.352 GOL.3: 2 residues within 4Å: Chain A: W.499 Ligands: KOC.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kaneshige, A. et al., A selective small-molecule STAT5 PROTAC degrader capable of achieving tumor regression in vivo. Nat.Chem.Biol. (2023)

Release Date

2023-02-15

Peptides

Signal transducer and activator of transcription 5A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Signal transducer and activator of transcription 5A

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