- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-trimer
- Ligands
- 12 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.1: 2 residues within 4Å:- Chain A: N.64
- Ligands: NAG.5
No protein-ligand interaction detected (PLIP)NAG.2: 4 residues within 4Å:- Chain A: N.32, T.34
- Chain B: N.32
- Ligands: NAG.6
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:N.32, B:N.32
NAG.3: 2 residues within 4Å:- Chain A: N.26
- Ligands: NAG.7
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.26
NAG.4: 3 residues within 4Å:- Chain A: V.43, N.45
- Ligands: NAG.8
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:V.43
- Hydrogen bonds: A:N.45
NAG.5: 4 residues within 4Å:- Chain A: N.64
- Chain B: N.64
- Ligands: NAG.1, NAG.9
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.64
NAG.6: 5 residues within 4Å:- Chain B: N.32, T.34
- Chain C: N.32
- Ligands: NAG.2, NAG.10
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:N.32, B:N.32
NAG.7: 3 residues within 4Å:- Chain B: N.26
- Ligands: NAG.3, NAG.11
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.26
NAG.8: 5 residues within 4Å:- Chain A: N.45
- Chain B: V.43, N.45
- Ligands: NAG.4, NAG.12
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:V.43
- Hydrogen bonds: B:N.45, A:N.45
NAG.9: 3 residues within 4Å:- Chain B: N.64
- Chain C: N.64
- Ligands: NAG.5
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.64
NAG.10: 3 residues within 4Å:- Chain C: N.32, T.34
- Ligands: NAG.6
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.32
NAG.11: 2 residues within 4Å:- Chain C: N.26
- Ligands: NAG.7
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.26
NAG.12: 4 residues within 4Å:- Chain B: N.45
- Chain C: V.43, N.45
- Ligands: NAG.8
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain B- Hydrophobic interactions: C:V.43
- Hydrogen bonds: C:N.45, B:N.45
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chang, A. et al., Homotypic fibrillization of TMEM106B across diverse neurodegenerative diseases. Cell (2022)
- Release Date
- 2022-03-23
- Peptides
- TMEM106B protein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-trimer
- Ligands
- 12 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chang, A. et al., Homotypic fibrillization of TMEM106B across diverse neurodegenerative diseases. Cell (2022)
- Release Date
- 2022-03-23
- Peptides
- TMEM106B protein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C