SMTL ID : 7u4k.1

Crystal structure of human GPX4-U46C-R152H in complex with ML162

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x L9C: 2-chloro-N-(3-chloro-4-methoxyphenyl)-N-[(1R)-2-oxo-2-[(2-phenylethyl)amino]-1-(thiophen-2-yl)ethyl]acetamide(Covalent)

L9C.1: 4 residues within 4Å: Chain A: Y.85, C.88, P.189, F.192 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.85, A:F.192

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: H.82, A.83, K.121 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.82 EDO.3: 4 residues within 4Å: Chain A: K.53, Y.54, F.57, R.91 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, H. et al., Small-molecule allosteric inhibitors of GPX4. Cell Chem Biol (2022)

Release Date

2022-12-07

Peptides

Phospholipid hydroperoxide glutathione peroxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phospholipid hydroperoxide glutathione peroxidase

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