SMTL ID : 7u4m.1

Crystal structure of human GPX4-U46C in complex with LOC1886

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

2 x LBI: 4-methoxy-1H-indole-2-carbaldehyde(Covalent)

LBI.1: 5 residues within 4Å: Chain A: A.24, D.28, D.29, R.31, C.32 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.28, A:C.32 LBI.2: 1 residues within 4Å: Chain A: C.88 No protein-ligand interaction detected (PLIP)

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: N.98, E.104, K.127 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.98, A:K.127, A:K.127 Water bridges: A:N.98, A:K.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, H. et al., Small-molecule allosteric inhibitors of GPX4. Cell Chem Biol (2022)

Release Date

2022-12-07

Peptides

Phospholipid hydroperoxide glutathione peroxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phospholipid hydroperoxide glutathione peroxidase

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