SMTL ID : 7u63.2 (2 other biounits)

Crystal Structure Anti-Oxycodone Antibody HY2-A12 Fab Complexed with Oxycodone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x OOX: 14-hydroxy-3-methoxy-17-methyl-5beta-4,5-epoxymorphinan-6-one(Non-covalent)

OOX.1: 8 residues within 4Å: Chain A: Y.34, W.93 Chain B: N.35, E.50, Y.52, Y.59, Y.105, W.109 9 PLIP interactions: 6 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:Y.59, B:W.109, B:W.109, A:Y.34, A:W.93, A:W.93 Hydrogen bonds: B:Y.52, B:Y.52 Salt bridges: B:E.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rodarte, J.V. et al., Structures of drug-specific monoclonal antibodies bound to opioids and nicotine reveal a common mode of binding. Structure (2023)

Release Date

2023-01-11

Peptides

HY2-A12 Fab Light Chain: A
HY2-A12 Fab Heavy Chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HY2-A12 Fab Light Chain

HY2-A12 Fab Heavy Chain

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