SMTL ID : 7u7n.1

IL-27 quaternary receptor signaling complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 1 residues within 4Å: Chain B: N.21 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.2: 3 residues within 4Å: Chain B: Y.8, N.61, T.63 No protein-ligand interaction detected (PLIP)

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.3: 2 residues within 4Å: Chain B: N.39, Y.42 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.4: 7 residues within 4Å: Chain B: F.86 Chain C: R.47, R.53, N.85, T.87, S.94, F.98 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:S.94

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 5 residues within 4Å: Chain A: Y.7, V.9, N.16, S.18, W.54 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.9 Hydrogen bonds: A:Y.7 NAG.6: 1 residues within 4Å: Chain A: N.41 No protein-ligand interaction detected (PLIP) NAG.7: 2 residues within 4Å: Chain B: K.108, N.109 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.108 NAG.8: 4 residues within 4Å: Chain B: E.133, N.135, K.151, E.179 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.133, B:N.135, B:K.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Caveney, N.A. et al., Structure of the IL-27 quaternary receptor signaling complex. Elife (2022)

Release Date

2022-05-25

Peptides

Interleukin-27 receptor subunit alpha: A
Interleukin-6 receptor subunit beta: B
Interleukin-27 subunit beta: C
Interleukin-27 subunit alpha: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Interleukin-27 receptor subunit alpha

Interleukin-6 receptor subunit beta

Interleukin-27 subunit beta

Interleukin-27 subunit alpha

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