SMTL ID : 7ui3.1

Apo-form of Human Tryptophan 2,3-Dioxygenase Induced by NADH Binding

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.18 Å

Oligo State

homo-tetramer

Ligands

4 x ZIQ: alpha-methyl-L-tryptophan(Non-covalent)

ZIQ.1: 12 residues within 4Å: Chain A: V.86, R.87, E.89, W.192, L.193, R.195, T.196, P.197, I.279, R.287, F.288, P.291 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:W.192, A:P.197, A:I.279, A:F.288, A:P.291 Hydrogen bonds: A:R.87, A:E.89, A:W.192 Salt bridges: A:R.195 ZIQ.2: 12 residues within 4Å: Chain B: V.86, R.87, E.89, W.192, L.193, R.195, T.196, P.197, I.279, R.287, F.288, P.291 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:W.192, B:T.196, B:P.197, B:I.279, B:F.288, B:P.291 Hydrogen bonds: B:R.87, B:E.89, B:W.192, B:W.192 Salt bridges: B:R.87, B:R.195 ZIQ.3: 12 residues within 4Å: Chain C: V.86, R.87, E.89, W.192, L.193, R.195, T.196, P.197, I.279, R.287, F.288, P.291 11 PLIP interactions: 11 interactions with chain C Hydrophobic interactions: C:W.192, C:P.197, C:I.279, C:F.288, C:F.288, C:P.291 Hydrogen bonds: C:V.86, C:R.87, C:W.192, C:W.192 Salt bridges: C:R.195 ZIQ.4: 12 residues within 4Å: Chain D: V.86, R.87, E.89, W.192, L.193, R.195, T.196, P.197, I.279, R.287, F.288, P.291 10 PLIP interactions: 10 interactions with chain D Hydrophobic interactions: D:W.192, D:I.279, D:F.288, D:F.288, D:P.291 Hydrogen bonds: D:R.87, D:E.89, D:W.192, D:W.192 Salt bridges: D:R.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yeh, S.-R. et al., Apo-form of Human Tryptophan 2,3-Dioxygenase Induced by NADH Binding. To Be Published

Release Date

2024-02-21

Peptides

Tryptophan 2,3-dioxygenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Tryptophan 2,3-dioxygenase

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