SMTL ID : 7uik.1

Mediator-PIC Early (Tail A + Upstream DNA & Activator)

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-1-1-1-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain C: C.11, C.14, C.21, C.28 Ligands: ZN.2 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.11, C:C.14, C:C.21, C:C.28 ZN.2: 5 residues within 4Å: Chain C: C.11, C.28, C.31, C.38 Ligands: ZN.1 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.11, C:C.28, C:C.31, C:C.38 ZN.3: 5 residues within 4Å: Chain D: C.11, C.14, C.21, C.28 Ligands: ZN.4 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.11, D:C.14, D:C.21, D:C.28 ZN.4: 5 residues within 4Å: Chain D: C.11, C.28, C.31, C.38 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.11, D:C.28, D:C.31, D:C.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gorbea Colon, J.J. et al., Structural basis of a transcription pre-initiation complex on a divergent promoter. Mol.Cell (2023)

Release Date

2023-03-01

Peptides

Regulatory protein GAL4: CD
Mediator of RNA polymerase II transcription subunit 15: E
Mediator of RNA polymerase II transcription subunit 2: F
Mediator of RNA polymerase II transcription subunit 3: G
Mediator of RNA polymerase II transcription subunit 14: H
Mediator of RNA polymerase II transcription subunit 5: I
Mediator of RNA polymerase II transcription subunit 16: J

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
T

D
U

E
o

F
b

G
c

H
n

I
e

J
p

Regulatory protein GAL4

Mediator of RNA polymerase II transcription subunit 15

Mediator of RNA polymerase II transcription subunit 2

Mediator of RNA polymerase II transcription subunit 3

Mediator of RNA polymerase II transcription subunit 14

Mediator of RNA polymerase II transcription subunit 5

Mediator of RNA polymerase II transcription subunit 16

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